Mutations at codon 516 of the rpoB gene can confer either low or high level resistance depending on the codon change [34]. It has been reported that substitution of aspartate by tyrosine in codon 516 induced RIF-resistance of M. tuberculosis with minimum inhibitory concentration (MIC) between 15 μg/ml and 25 μg/ml in BACTEC 460-TB system [34]. OICR-9429 mw In our study, RIF susceptibility was evaluated in Lowenstein

Jensen at a concentration of 50 μg/ml. This might explain why strains harbouring this mutation in our study were phenotypically RIF-susceptible. Among the 7 isolates which were altered genetically, 6 were MDR strains and one a RIF-SM-resistant isolate. Thus, rpoB could be an indicator selleck chemicals of multidrug resistance among M. tuberculosis strains. This observation was previously reported among Cameroonian M. tuberculosis isolates [30]. It has been previously shown that about 10–15.9% of RIF -resistant isolates do not have mutations in the RRDR [15]. More than 90% of RIF -resistant strains from other regions had mutations located in the 81-bp core region [35–38]. This indicated a possible CHIR-99021 purchase occurrence of alteration outside the core region of 81 bp of the examined rpoB. Among other explanations, several additional

genes might be involved in RIF-resistance such as rpoA, rpoC or rpoD[39]. The natural resistance to RIF in some M. avium and M. intracellular strains is known to be a result of efficient cell wall permeability and exclusion barrier, suggesting that these elements could also play an important role in M. tuberculosis[34]. However, in our study, all the isolates harboured mutations in the RRDR core region. Common genes known to be involved in INH-resistance are katG, inhA, ahpC, oxyR[10]. Several investigators have shown that INH-resistance in M. tuberculosis isolates arise principally from a katG gene alteration

[40–42] that corresponds essentially to point mutations in codon 315 (point mutations in two bases 944 and 945). In this study, 18 (40.0%) INH Methane monooxygenase -resistant isolates were genetically altered in the katG codon 315. Others studies have reported 95% of all INH-resistant isolates with mutations in codon 315 [43]. Out of the 6 MDR strains identified in this study, 5 displayed a high level resistance to isoniazid with a katG alteration and the remaining one displayed a low level INH-resistance with -32G → A mutation in oxyR-ahpC intergenic region. Therefore, it will be useful to combine katG315 and -15 point mutation inhA promoter region with rpoB in molecular assays looking at drug resistance. Since some of the INHR strains in this study had no mutation in katG315 and -15 inhA promoter region, it is likely that mutations in other genes, such as the inhA locus, contribute to resistance.